Resources

Developed and maintained by our team :

Databases

  1. IDSL.XDB: The Blood Exposome Database - www.bloodexposome.org

  2. IDSL.CCDB: Chemical Correlation Database : www.ccdb.idsl.me

  3. IDSL.SPECDB : A mass spectral database and online search engine. (www.specdb.idsl.site)

  4. Chemical Space of Pesticides: http://pesticide.barupal.org/

Software (online and local installation)

  1. IDSL.IPA: Intrinsic Peak Analyzer, R package : (www.ipa.idsl.me) ( https://cran.r-project.org/package=IDSL.IPA )

  2. IDSL.UFA: Ultimate Formula Annotation , R package: (www.ufa.idsl.me) ( https://cran.r-project.org/package=IDSL.UFA )

  3. IDSL.UFAx : Exhaustive Formula Annotation for ions to formula. R package, ( https://cran.r-project.org/package=IDSL.UFAx )

  4. IDSL.FSA : Fragmentation Spectra Analysis (www.fsa.idsl.me )

  5. IDSL.MXP : A light-weight MzML/MzXML parser (r-package) ( https://cran.r-project.org/package=IDSL.MXP )

  6. IDSL.IPC: (Isotopic Profile Calculator) https://ipc.idsl.me/

  7. IDSL.GOA : (Gene Ontology Analysis) (www.goa.idsl.site)

  8. IARC Monographs Agent Prioritization : (https://cancer.idsl.me/ )

  9. ChemRICH for chemical set enrichment analysis : (https://chemrich.idsl.me/ )

  10. MetaMapp for metabolic network mapping : https://github.com/barupal/metamapp

  11. NCBI Query Tool : an online interface to query NCBI database https://nqt.idsl.site/

  12. IDSL.PubMed: query PubMed with a simpler interface (https://pubmed.idsl.site/ )

  13. IDSL.PMC: Query full text data in the PubMed Central (paragraph level) (https://pmc.idsl.site/ )

  1. A list of metabolite names in the Metabolomics Workbench repository (https://zenodo.org/record/5860638#.YizHvdXMKpo)

  2. A list of metabolite names in the EBI Metabolights repository (https://zenodo.org/record/5879988#.YizH4dXMKpo)

  3. A list of metabolite names reported by Metabolon's assay in open-access papers (https://zenodo.org/record/5893535#.YizHvNXMKpo)

  4. Compounds in the blood exposome database w/o DDA spectra (https://zenodo.org/record/5933345#.YizIJNXMKpo)

  5. High priority chemicals for exposomics that need to be included in the public mass spectral repositories. ( https://zenodo.org/record/6002512#.YizITdXMKpo )